No. words: 1205; after pruning: 1166


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      3

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.3 (1,1:486)  466  0.41 0.00 0.21  UCD021F_H04_BG605258Ta20P025C05P012H081F2_018.ab1        1   487 (61)  C UCD021R_H04_BG605258Ta20P025C05P012H081R2_018.ab1   (51)   486     1 *
Merge:(0)    0    0.0 1.8 (2,1:21)  114  1.67 0.00 0.00  UCD021R_H04_BG605258Ta20P025C05P012H081R2_018.ab1      347   466 (71)  C UCD011F_B08_BG605258Ta20P025C05P012H081F1_062.ab1   (0)   120     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    3      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       2        0

Gap   # merges  # failures
 size
 0       2        0

Offset
  0       1 
  1       2 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    3      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    3    1

Chimera merges: 


Contig 1:  338 nodes

 134 str. conn. components

Path
    1  C UCD021R_H04_BG605258Ta20P025C05P012H081R2_018.ab1   537 
  521    UCD021F_H04_BG605258Ta20P025C05P012H081F2_018.ab1   470 
Contig length: old 598, new 599

Contig length: old 599, new 599
New start: 0