No. words: 1281; after pruning: 1242


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      3

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.2 (1,1:468)  452  0.21 0.00 0.21  UCD021F_B05_BG605258Ta22P025C05P012H081F2_045.ab1        1   469 (43)  C UCD021R_B05_BG605258Ta22P025C05P012H081R2_045.ab1   (78)   468     1 *
Merge:(0)    0    0.0 1.9 (2,1:-17)  164  5.83 0.00 0.49  UCD021F_B05_BG605258Ta22P025C05P012H081F2_045.ab1        1   206 (306)    UCD011F_D08_BG605258Ta22P025C05P012H081F1_058.ab1       19   223 (0) *

Pass: 3
#reads  #contigs (not counting singlets)
    3      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       2        0

Gap   # merges  # failures
 size
 0       2        0

Offset
  0       2 
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    3      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    3    1

Chimera merges: 


Contig 1:  390 nodes

 150 str. conn. components

Path
    1  C UCD021R_B05_BG605258Ta22P025C05P012H081R2_045.ab1   546 
  530    UCD021F_B05_BG605258Ta22P025C05P012H081F2_045.ab1   452 
Contig length: old 589, new 590

Contig length: old 590, new 590
New start: 0