No. words: 1241; after pruning: 1215


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.6 (1,1:619)  529  1.38 0.00 0.17  UCD027F_D03_BG608232Ta14P025A06P036B021F1_025.ab1       42   621 (41)  C UCD027R_D03_BG608232Ta14P025A06P036B021R1_025.ab1   (0)   579     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  268 nodes

 136 str. conn. components

Path
    1    UCD027F_D03_BG608232Ta14P025A06P036B021F1_025.ab1     1 
  448  C UCD027R_D03_BG608232Ta14P025A06P036B021R1_025.ab1   173 
  452    UCD027F_D03_BG608232Ta14P025A06P036B021F1_025.ab1   452 
  607  C UCD027R_D03_BG608232Ta14P025A06P036B021R1_025.ab1    14 
  611    UCD027F_D03_BG608232Ta14P025A06P036B021F1_025.ab1   611 
Contig length: old 662, new 662

Contig length: old 662, new 662
New start: 0