No. words: 1464; after pruning: 1438


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.6 (1,1:761)  654  0.00 0.00 0.00  UCW047_A03_BE403761Ta17P002D06P022C111R1_031.ab1      107   762 (46)  C UCW048_A03_BE403761Ta17P002D06P022C111F1_031.ab1   (0)   656     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  330 nodes

 167 str. conn. components

Path
    1    UCW047_A03_BE403761Ta17P002D06P022C111R1_031.ab1     1 
  518  C UCW048_A03_BE403761Ta17P002D06P022C111F1_031.ab1   245 
  526    UCW047_A03_BE403761Ta17P002D06P022C111R1_031.ab1   526 
  602  C UCW048_A03_BE403761Ta17P002D06P022C111F1_031.ab1   161 
  610    UCW047_A03_BE403761Ta17P002D06P022C111R1_031.ab1   610 
  622  C UCW048_A03_BE403761Ta17P002D06P022C111F1_031.ab1   141 
  630    UCW047_A03_BE403761Ta17P002D06P022C111R1_031.ab1   630 
  638  C UCW048_A03_BE403761Ta17P002D06P022C111F1_031.ab1   125 
  746    UCW047_A03_BE403761Ta17P002D06P022C111R1_031.ab1   746 
  750  C UCW048_A03_BE403761Ta17P002D06P022C111F1_031.ab1    13 
  754    UCW047_A03_BE403761Ta17P002D06P022C111R1_031.ab1   754 
Contig length: old 808, new 808

Contig length: old 808, new 808
New start: 0