No. words: 1129; after pruning: 1103


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 9.9 (1,1:513)  491  0.00 0.00 0.20  UCW047_F06_BE497368Ta22P002H09P022F111F1_038.ab1        3   514 (51)  C UCW048_F06_BE497368Ta22P002H09P022F111R1_038.ab1   (53)   511     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  254 nodes

 129 str. conn. components

Path
    1  C UCW048_F06_BE497368Ta22P002H09P022F111R1_038.ab1   564 
   65    UCW047_F06_BE497368Ta22P002H09P022F111F1_038.ab1    14 
   69  C UCW048_F06_BE497368Ta22P002H09P022F111R1_038.ab1   496 
  265    UCW047_F06_BE497368Ta22P002H09P022F111F1_038.ab1   214 
  269  C UCW048_F06_BE497368Ta22P002H09P022F111R1_038.ab1   296 
  393    UCW047_F06_BE497368Ta22P002H09P022F111F1_038.ab1   342 
  397  C UCW048_F06_BE497368Ta22P002H09P022F111R1_038.ab1   168 
  405    UCW047_F06_BE497368Ta22P002H09P022F111F1_038.ab1   354 
  409  C UCW048_F06_BE497368Ta22P002H09P022F111R1_038.ab1   156 
  421    UCW047_F06_BE497368Ta22P002H09P022F111F1_038.ab1   370 
  433  C UCW048_F06_BE497368Ta22P002H09P022F111R1_038.ab1   132 
  461    UCW047_F06_BE497368Ta22P002H09P022F111F1_038.ab1   410 
  465  C UCW048_F06_BE497368Ta22P002H09P022F111R1_038.ab1   100 
  469    UCW047_F06_BE497368Ta22P002H09P022F111F1_038.ab1   418 
  493  C UCW048_F06_BE497368Ta22P002H09P022F111R1_038.ab1    72 
  497    UCW047_F06_BE497368Ta22P002H09P022F111F1_038.ab1   446 
  501  C UCW048_F06_BE497368Ta22P002H09P022F111R1_038.ab1    64 
  517    UCW047_F06_BE497368Ta22P002H09P022F111F1_038.ab1   466 
Contig length: old 615, new 616

Contig length: old 616, new 616
New start: 0