No. words: 1724; after pruning: 1656


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.3 (1,1:824)  793  0.36 0.36 0.12  UCW018F_E11_BE498768Ld05P014A06P014A121F1_087.ab1        1   825 (41)  C UCW018R_E11_BE498768Ld05P014A06P014A121R1_087.ab1   (31)   827     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  394 nodes

 199 str. conn. components

Path
    1  C UCW018R_E11_BE498768Ld05P014A06P014A121R1_087.ab1   858 
   49    UCW018F_E11_BE498768Ld05P014A06P014A121F1_087.ab1    16 
  532  C UCW018R_E11_BE498768Ld05P014A06P014A121R1_087.ab1   326 
  840    UCW018F_E11_BE498768Ld05P014A06P014A121F1_087.ab1   807 
Contig length: old 899, new 899

Contig length: old 899, new 899
New start: 0