No. words: 1630; after pruning: 1604


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.1 (1,1:1039)  584  0.00 0.00 0.00  UCW049_B06_BE499599Sn27P002H08P022C121F1_046.ab1      192   781 (0)  C UCW050_B06_BE499599Sn27P002H08P022C121R1_046.ab1   (0)   849   260 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  296 nodes

 150 str. conn. components

Path
    1    UCW049_B06_BE499599Sn27P002H08P022C121F1_046.ab1     1 
  483  C UCW050_B06_BE499599Sn27P002H08P022C121R1_046.ab1   558 
  503    UCW049_B06_BE499599Sn27P002H08P022C121F1_046.ab1   503 
  511  C UCW050_B06_BE499599Sn27P002H08P022C121R1_046.ab1   530 
  531    UCW049_B06_BE499599Sn27P002H08P022C121F1_046.ab1   531 
  571  C UCW050_B06_BE499599Sn27P002H08P022C121R1_046.ab1   470 
  591    UCW049_B06_BE499599Sn27P002H08P022C121F1_046.ab1   591 
  611  C UCW050_B06_BE499599Sn27P002H08P022C121R1_046.ab1   430 
Contig length: old 1040, new 1040

Contig length: old 1040, new 1040
New start: 0