No. words: 1202; after pruning: 1176


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 3.1 (1,1:1001)  188  0.51 0.00 0.00  UCW047_D09_BE499599Ta20P002H08P022A121F1_073.ab1      173   370 (2)  C UCW048_D09_BE499599Ta20P002H08P022A121R1_073.ab1   (0)   830   633 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  98 nodes

 51 str. conn. components

Path
    1    UCW047_D09_BE499599Ta20P002H08P022A121F1_073.ab1     1 
  326  C UCW048_D09_BE499599Ta20P002H08P022A121R1_073.ab1   677 
  330    UCW047_D09_BE499599Ta20P002H08P022A121F1_073.ab1   330 
  350  C UCW048_D09_BE499599Ta20P002H08P022A121R1_073.ab1   653 
Contig length: old 1002, new 1002

Contig length: old 1002, new 1002
New start: 0