No. words: 1188; after pruning: 1162


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 3.2 (1,1:989)  185  1.52 0.00 0.00  UCW047_B08_BE499599Td10P002H08P022A121F1_062.ab1      237   434 (0)  C UCW048_B08_BE499599Td10P002H08P022A121R1_062.ab1   (0)   754   557 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  92 nodes

 48 str. conn. components

Path
    1    UCW047_B08_BE499599Td10P002H08P022A121F1_062.ab1     1 
  362  C UCW048_B08_BE499599Td10P002H08P022A121R1_062.ab1   629 
  370    UCW047_B08_BE499599Td10P002H08P022A121F1_062.ab1   370 
  374  C UCW048_B08_BE499599Td10P002H08P022A121R1_062.ab1   617 
Contig length: old 990, new 990

Contig length: old 990, new 990
New start: 0