No. words: 1661; after pruning: 1607


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.4 (1,1:1062)  575  0.67 0.17 0.00  UCW001F_D07_BE591275Ld04P002G04G101F1_058.ab1      236   832 (0)  C UCW001R_D07_BE591275Ld04P002G04G101R1_058.ab1   (0)   829   232 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  290 nodes

 147 str. conn. components

Path
    1    UCW001F_D07_BE591275Ld04P002G04G101F1_058.ab1     1 
  506  C UCW001R_D07_BE591275Ld04P002G04G101R1_058.ab1   559 
Contig length: old 1063, new 1064

Contig length: old 1064, new 1064
New start: 0