No. words: 1647; after pruning: 1621


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.4 (1,1:978)  646  0.30 0.00 0.15  UCW033_A12_BE591275Sn26P001G09P022F051R1_096.ab1      133   801 (0)  C UCW034_A12_BE591275Sn26P001G09P022F051F1_096.ab1   (0)   846   179 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  330 nodes

 167 str. conn. components

Path
    1    UCW033_A12_BE591275Sn26P001G09P022F051R1_096.ab1     1 
  550  C UCW034_A12_BE591275Sn26P001G09P022F051F1_096.ab1   430 
  574    UCW033_A12_BE591275Sn26P001G09P022F051R1_096.ab1   574 
  578  C UCW034_A12_BE591275Sn26P001G09P022F051F1_096.ab1   402 
Contig length: old 979, new 979

Contig length: old 979, new 979
New start: 0