No. words: 1120; after pruning: 1094


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 3.1 (1,1:974)  135  0.69 0.00 0.00  UCW033_G12_BE591275Sn32P001G09P022F051R1_084.ab1      736   880 (0)  C UCW034_G12_BE591275Sn32P001G09P022F051F1_084.ab1   (0)   240    96 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  70 nodes

 37 str. conn. components

Path
    1    UCW033_G12_BE591275Sn32P001G09P022F051R1_084.ab1     1 
  779  C UCW034_G12_BE591275Sn32P001G09P022F051F1_084.ab1   197 
  791    UCW033_G12_BE591275Sn32P001G09P022F051R1_084.ab1   791 
  795  C UCW034_G12_BE591275Sn32P001G09P022F051F1_084.ab1   181 
  827    UCW033_G12_BE591275Sn32P001G09P022F051R1_084.ab1   827 
  835  C UCW034_G12_BE591275Sn32P001G09P022F051F1_084.ab1   141 
Contig length: old 975, new 975

Contig length: old 975, new 975
New start: 0