No. words: 1729; after pruning: 1703


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 17.1 (1,1:957)  758  0.00 0.00 0.00  UCW033_F07_BE591275Td06P001G09P022D051R1_053.ab1       29   799 (0)  C UCW034_F07_BE591275Td06P001G09P022D051F1_053.ab1   (0)   930   160 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  388 nodes

 196 str. conn. components

Path
    1    UCW033_F07_BE591275Td06P001G09P022D051R1_053.ab1     1 
  428  C UCW034_F07_BE591275Td06P001G09P022D051F1_053.ab1   531 
Contig length: old 958, new 958

Contig length: old 958, new 958
New start: 0