No. words: 1644; after pruning: 1618


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 17.2 (1,1:779)  759  0.13 0.00 0.00  UCW051_H08_BF201102Ta16P001G05P022C071R1_050.ab1        1   780 (36)  C UCW052_H08_BF201102Ta16P001G05P022C071F1_050.ab1   (48)   780     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  390 nodes

 197 str. conn. components

Path
    1  C UCW052_H08_BF201102Ta16P001G05P022C071F1_050.ab1   828 
   60    UCW051_H08_BF201102Ta16P001G05P022C071R1_050.ab1    12 
   64  C UCW052_H08_BF201102Ta16P001G05P022C071F1_050.ab1   765 
   68    UCW051_H08_BF201102Ta16P001G05P022C071R1_050.ab1    20 
  136  C UCW052_H08_BF201102Ta16P001G05P022C071F1_050.ab1   693 
  140    UCW051_H08_BF201102Ta16P001G05P022C071R1_050.ab1    92 
  144  C UCW052_H08_BF201102Ta16P001G05P022C071F1_050.ab1   685 
  152    UCW051_H08_BF201102Ta16P001G05P022C071R1_050.ab1   104 
  156  C UCW052_H08_BF201102Ta16P001G05P022C071F1_050.ab1   673 
  160    UCW051_H08_BF201102Ta16P001G05P022C071R1_050.ab1   112 
  172  C UCW052_H08_BF201102Ta16P001G05P022C071F1_050.ab1   657 
  180    UCW051_H08_BF201102Ta16P001G05P022C071R1_050.ab1   132 
  184  C UCW052_H08_BF201102Ta16P001G05P022C071F1_050.ab1   645 
  204    UCW051_H08_BF201102Ta16P001G05P022C071R1_050.ab1   156 
  208  C UCW052_H08_BF201102Ta16P001G05P022C071F1_050.ab1   621 
  704    UCW051_H08_BF201102Ta16P001G05P022C071R1_050.ab1   656 
  708  C UCW052_H08_BF201102Ta16P001G05P022C071F1_050.ab1   121 
  825    UCW051_H08_BF201102Ta16P001G05P022C071R1_050.ab1   777 
Contig length: old 864, new 864

Contig length: old 864, new 864
New start: 0