No. words: 1674; after pruning: 1648


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.0 (1,1:1042)  621  0.00 0.00 0.00  UCW006F_B03_BG607308Ld02P002B03B091F1_025.ab1      177   807 (0)  C UCW006R_B03_BG607308Ld02P002B03B091R1_025.ab1   (0)   867   237 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  318 nodes

 161 str. conn. components

Path
    1    UCW006F_B03_BG607308Ld02P002B03B091F1_025.ab1     1 
  488  C UCW006R_B03_BG607308Ld02P002B03B091R1_025.ab1   556 
  492    UCW006F_B03_BG607308Ld02P002B03B091F1_025.ab1   492 
  508  C UCW006R_B03_BG607308Ld02P002B03B091R1_025.ab1   536 
Contig length: old 1043, new 1043

Contig length: old 1043, new 1043
New start: 0