No. words: 1062; after pruning: 1036


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    6    0.0 7.0 (1,1:486)  450  0.00 0.21 0.00  BE398268As02P027E06P027E121F1_073.ab1        1   481 (46)  C BE398268As02P027E06P027E121R1_073.ab1   (47)   488     7 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 6       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  240 nodes

 122 str. conn. components

Path
    1  C BE398268As02P027E06P027E121R1_073.ab1   535 
  218    BE398268As02P027E06P027E121F1_073.ab1   170 
Contig length: old 575, new 575

Contig length: old 575, new 575
New start: 0