No. words: 1129; after pruning: 1103


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.3 (1,1:392)  365  0.25 0.00 0.25  BE398268Ld05P027E06P027E121F1_076.ab1        1   393 (189)  C BE398268Ld05P027E06P027E121R1_076.ab1   (155)   392     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  190 nodes

 97 str. conn. components

Path
    1  C BE398268Ld05P027E06P027E121R1_076.ab1   547 
  231    BE398268Ld05P027E06P027E121F1_076.ab1    76 
  251  C BE398268Ld05P027E06P027E121R1_076.ab1   297 
  323    BE398268Ld05P027E06P027E121F1_076.ab1   168 
Contig length: old 736, new 737

Contig length: old 737, new 737
New start: 0