No. words: 1096; after pruning: 1070


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 3.2 (1,1:446)  404  0.22 0.22 0.67  BE398268Ld09P027E06P027E121F1_068.ab1        1   449 (45)  C BE398268Ld09P027E06P027E121R1_068.ab1   (155)   447     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  206 nodes

 105 str. conn. components

Path
    1  C BE398268Ld09P027E06P027E121R1_068.ab1   602 
  451    BE398268Ld09P027E06P027E121F1_068.ab1   295 
  455  C BE398268Ld09P027E06P027E121R1_068.ab1   148 
  487    BE398268Ld09P027E06P027E121F1_068.ab1   331 
  491  C BE398268Ld09P027E06P027E121R1_068.ab1   112 
  503    BE398268Ld09P027E06P027E121F1_068.ab1   347 
  507  C BE398268Ld09P027E06P027E121R1_068.ab1    96 
  511    BE398268Ld09P027E06P027E121F1_068.ab1   355 
  515  C BE398268Ld09P027E06P027E121R1_068.ab1    88 
  575    BE398268Ld09P027E06P027E121F1_068.ab1   419 
Contig length: old 649, new 650

Contig length: old 650, new 650
New start: 0 
S Change at: 559; seg lengths: entry 1, contig 1