No. words: 1084; after pruning: 1058


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 4.3 (1,1:384)  353  0.00 0.52 0.26  BE398268Ld10P027E06P027E121F1_066.ab1        2   385 (181)  C BE398268Ld10P027E06P027E121R1_066.ab1   (133)   385     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  184 nodes

 94 str. conn. components

Path
    1  C BE398268Ld10P027E06P027E121R1_066.ab1   518 
  273    BE398268Ld10P027E06P027E121F1_066.ab1   139 
  433  C BE398268Ld10P027E06P027E121R1_066.ab1    86 
  441    BE398268Ld10P027E06P027E121F1_066.ab1   307 
Contig length: old 699, new 700

Contig length: old 700, new 700
New start: 0