No. words: 970; after pruning: 930


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    0   -2.1 -2.1 (1,1:488)  300  5.19 0.00 0.78  BE398279As01P016A01A07R1_011.ab1        1   385 (0)  C BE398279As01P016A01A07F1_011.ab1   (98)   487   106 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-2.1       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  134 nodes

 69 str. conn. components

Path
    1  C BE398279As01P016A01A07F1_011.ab1   585 
Contig length: old 585, new 585

Contig length: old 585, new 585
New start: 0 
S Change at: 157; seg lengths: entry 2, contig 2