No. words: 1221; after pruning: 1195


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.5 (1,1:555)  501  0.00 0.19 0.00  BE398279Ld01P016A01A07R1_003.ab1        1   522 (0)  C BE398279Ld01P016A01A07F1_003.ab1   (142)   557    35 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  258 nodes

 131 str. conn. components

Path
    1  C BE398279Ld01P016A01A07F1_003.ab1   699 
  515    BE398279Ld01P016A01A07R1_003.ab1   372 
  639  C BE398279Ld01P016A01A07F1_003.ab1    61 
Contig length: old 699, new 699

Contig length: old 699, new 699
New start: 0