No. words: 1198; after pruning: 1172


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.0 (1,1:552)  479  0.00 0.20 0.00  BE398279Ld02P016A01A07R1_001.ab1        1   501 (0)  C BE398279Ld02P016A01A07F1_001.ab1   (143)   554    53 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  250 nodes

 127 str. conn. components

Path
    1  C BE398279Ld02P016A01A07F1_001.ab1   697 
  154    BE398279Ld02P016A01A07R1_001.ab1    10 
  174  C BE398279Ld02P016A01A07F1_001.ab1   524 
  522    BE398279Ld02P016A01A07R1_001.ab1   378 
  558  C BE398279Ld02P016A01A07F1_001.ab1   140 
  586    BE398279Ld02P016A01A07R1_001.ab1   442 
  594  C BE398279Ld02P016A01A07F1_001.ab1   104 
  598    BE398279Ld02P016A01A07R1_001.ab1   454 
  618  C BE398279Ld02P016A01A07F1_001.ab1    80 
  622    BE398279Ld02P016A01A07R1_001.ab1   478 
  634  C BE398279Ld02P016A01A07F1_001.ab1    64 
Contig length: old 697, new 697

Contig length: old 697, new 697
New start: 0