No. words: 1405; after pruning: 1356


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.0 (1,1:556)  527  0.54 0.18 0.18  BE398279Ld04P016A01A07R1_014.ab1        1   557 (150)  C BE398279Ld04P016A01A07F1_014.ab1   (141)   557     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  266 nodes

 135 str. conn. components

Path
    1  C BE398279Ld04P016A01A07F1_014.ab1   698 
  522    BE398279Ld04P016A01A07R1_014.ab1   380 
  634  C BE398279Ld04P016A01A07F1_014.ab1    65 
  646    BE398279Ld04P016A01A07R1_014.ab1   504 
  654  C BE398279Ld04P016A01A07F1_014.ab1    45 
  682    BE398279Ld04P016A01A07R1_014.ab1   541 
Contig length: old 848, new 848

Contig length: old 848, new 849
New start: 0 
I Change at: 680; seg lengths: entry 1, contig 0