No. words: 1383; after pruning: 1343


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.3 (1,1:558)  535  0.00 0.00 0.18  BE398279Ld06P016A01A07R1_010.ab1        1   559 (123)  C BE398279Ld06P016A01A07F1_010.ab1   (143)   558     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  278 nodes

 141 str. conn. components

Path
    1  C BE398279Ld06P016A01A07F1_010.ab1   701 
  527    BE398279Ld06P016A01A07R1_010.ab1   384 
  639  C BE398279Ld06P016A01A07F1_010.ab1    63 
  643    BE398279Ld06P016A01A07R1_010.ab1   500 
Contig length: old 824, new 825

Contig length: old 825, new 825
New start: 0 
S Change at: 754; seg lengths: entry 1, contig 1