No. words: 1375; after pruning: 1335


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.5 (1,1:557)  534  0.00 0.00 0.18  BE398279Ld08P016A01A07R1_006.ab1        1   558 (118)  C BE398279Ld08P016A01A07F1_006.ab1   (142)   557     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  278 nodes

 141 str. conn. components

Path
    1  C BE398279Ld08P016A01A07F1_006.ab1   699 
  306    BE398279Ld08P016A01A07R1_006.ab1   164 
  638  C BE398279Ld08P016A01A07F1_006.ab1    62 
  646    BE398279Ld08P016A01A07R1_006.ab1   504 
Contig length: old 817, new 818

Contig length: old 818, new 818
New start: 0 
S Change at: 752; seg lengths: entry 1, contig 1