No. words: 1009; after pruning: 969


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.7 (1,1:550)  394  1.18 0.00 0.00  BE398279Tu01P016A01A07R1_015.ab1        1   424 (0)  C BE398279Tu01P016A01A07F1_015.ab1   (34)   551   128 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  200 nodes

 102 str. conn. components

Path
    1  C BE398279Tu01P016A01A07F1_015.ab1   585 
  134    BE398279Tu01P016A01A07R1_015.ab1   100 
  138  C BE398279Tu01P016A01A07F1_015.ab1   448 
  142    BE398279Tu01P016A01A07R1_015.ab1   108 
  178  C BE398279Tu01P016A01A07F1_015.ab1   408 
  190    BE398279Tu01P016A01A07R1_015.ab1   156 
  194  C BE398279Tu01P016A01A07F1_015.ab1   392 
  198    BE398279Tu01P016A01A07R1_015.ab1   164 
  218  C BE398279Tu01P016A01A07F1_015.ab1   368 
  230    BE398279Tu01P016A01A07R1_015.ab1   196 
  234  C BE398279Tu01P016A01A07F1_015.ab1   352 
  294    BE398279Tu01P016A01A07R1_015.ab1   260 
  298  C BE398279Tu01P016A01A07F1_015.ab1   288 
Contig length: old 585, new 585

Contig length: old 585, new 585
New start: 0