No. words: 1428; after pruning: 1402


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    6    0.0 13.5 (1,1:678)  638  0.00 0.15 0.00  BE399869As02P027G06P027G121F1_045.ab1        8   678 (34)  C BE399869As02P027G06P027G121R1_045.ab1   (43)   673     2 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 6       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  334 nodes

 169 str. conn. components

Path
    1  C BE399869As02P027G06P027G121R1_045.ab1   716 
   61    BE399869As02P027G06P027G121F1_045.ab1    24 
   65  C BE399869As02P027G06P027G121R1_045.ab1   652 
  189    BE399869As02P027G06P027G121F1_045.ab1   152 
  213  C BE399869As02P027G06P027G121R1_045.ab1   504 
  537    BE399869As02P027G06P027G121F1_045.ab1   500 
  657  C BE399869As02P027G06P027G121R1_045.ab1    60 
  661    BE399869As02P027G06P027G121F1_045.ab1   624 
  685  C BE399869As02P027G06P027G121R1_045.ab1    32 
  689    BE399869As02P027G06P027G121F1_045.ab1   652 
Contig length: old 749, new 749

Contig length: old 749, new 749
New start: 0