No. words: 958; after pruning: 932


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 7.7 (1,1:402)  394  0.00 0.00 0.00  BE403201Sn28P088E01P052D121F1_025.ab1        4   403 (87)  C BE403201Sn28P088E01P052D121R1_025.ab1   (68)   400     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  202 nodes

 103 str. conn. components

Path
    1  C BE403201Sn28P088E01P052D121R1_025.ab1   468 
  124    BE403201Sn28P088E01P052D121F1_025.ab1    59 
  128  C BE403201Sn28P088E01P052D121R1_025.ab1   341 
  136    BE403201Sn28P088E01P052D121F1_025.ab1    71 
  140  C BE403201Sn28P088E01P052D121R1_025.ab1   329 
  256    BE403201Sn28P088E01P052D121F1_025.ab1   191 
  276  C BE403201Sn28P088E01P052D121R1_025.ab1   193 
  296    BE403201Sn28P088E01P052D121F1_025.ab1   231 
  312  C BE403201Sn28P088E01P052D121R1_025.ab1   157 
  320    BE403201Sn28P088E01P052D121F1_025.ab1   255 
  324  C BE403201Sn28P088E01P052D121R1_025.ab1   145 
  352    BE403201Sn28P088E01P052D121F1_025.ab1   287 
Contig length: old 555, new 555

Contig length: old 555, new 555
New start: 0