No. words: 1227; after pruning: 1201


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 7.8 (1,1:460)  446  0.00 0.22 0.22  BE403619Ld03P016B01B07R1_023.ab1        1   460 (167)  C BE403619Ld03P016B01B07F1_023.ab1   (139)   461     2 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  226 nodes

 115 str. conn. components

Path
    1  C BE403619Ld03P016B01B07F1_023.ab1   600 
  192    BE403619Ld03P016B01B07R1_023.ab1    52 
  200  C BE403619Ld03P016B01B07F1_023.ab1   401 
  228    BE403619Ld03P016B01B07R1_023.ab1    88 
  232  C BE403619Ld03P016B01B07F1_023.ab1   369 
  280    BE403619Ld03P016B01B07R1_023.ab1   140 
  284  C BE403619Ld03P016B01B07F1_023.ab1   317 
  292    BE403619Ld03P016B01B07R1_023.ab1   152 
  300  C BE403619Ld03P016B01B07F1_023.ab1   301 
  312    BE403619Ld03P016B01B07R1_023.ab1   172 
Contig length: old 766, new 767

Contig length: old 767, new 767
New start: 0