No. words: 1227; after pruning: 1201


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.4 (1,1:458)  449  0.00 0.00 0.22  BE403619Ld08P016B01B07R1_030.ab1        1   459 (141)  C BE403619Ld08P016B01B07F1_030.ab1   (169)   458     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  228 nodes

 116 str. conn. components

Path
    1  C BE403619Ld08P016B01B07F1_030.ab1   627 
  218    BE403619Ld08P016B01B07R1_030.ab1    49 
  230  C BE403619Ld08P016B01B07F1_030.ab1   398 
  242    BE403619Ld08P016B01B07R1_030.ab1    73 
  262  C BE403619Ld08P016B01B07F1_030.ab1   366 
  290    BE403619Ld08P016B01B07R1_030.ab1   121 
  330  C BE403619Ld08P016B01B07F1_030.ab1   298 
  342    BE403619Ld08P016B01B07R1_030.ab1   173 
  394  C BE403619Ld08P016B01B07F1_030.ab1   234 
  398    BE403619Ld08P016B01B07R1_030.ab1   229 
Contig length: old 768, new 769

Contig length: old 769, new 769
New start: 0