No. words: 1203; after pruning: 1177


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 8.2 (1,1:564)  534  0.00 0.18 0.18  BE403757Ta11P088G01P095D121F1_005.ab1        1   561 (38)  C BE403757Ta11P088G01P095D121R1_005.ab1   (39)   565     5 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  276 nodes

 140 str. conn. components

Path
    1  C BE403757Ta11P088G01P095D121R1_005.ab1   604 
   73    BE403757Ta11P088G01P095D121F1_005.ab1    33 
   93  C BE403757Ta11P088G01P095D121R1_005.ab1   512 
  209    BE403757Ta11P088G01P095D121F1_005.ab1   169 
  261  C BE403757Ta11P088G01P095D121R1_005.ab1   344 
  305    BE403757Ta11P088G01P095D121F1_005.ab1   265 
  337  C BE403757Ta11P088G01P095D121R1_005.ab1   268 
  389    BE403757Ta11P088G01P095D121F1_005.ab1   349 
  405  C BE403757Ta11P088G01P095D121R1_005.ab1   200 
  433    BE403757Ta11P088G01P095D121F1_005.ab1   393 
  441  C BE403757Ta11P088G01P095D121R1_005.ab1   164 
  457    BE403757Ta11P088G01P095D121F1_005.ab1   417 
  477  C BE403757Ta11P088G01P095D121R1_005.ab1   128 
  485    BE403757Ta11P088G01P095D121F1_005.ab1   445 
  493  C BE403757Ta11P088G01P095D121R1_005.ab1   112 
  505    BE403757Ta11P088G01P095D121F1_005.ab1   465 
  513  C BE403757Ta11P088G01P095D121R1_005.ab1    92 
  521    BE403757Ta11P088G01P095D121F1_005.ab1   481 
  525  C BE403757Ta11P088G01P095D121R1_005.ab1    80 
  529    BE403757Ta11P088G01P095D121F1_005.ab1   489 
Contig length: old 638, new 639

Contig length: old 639, new 639
New start: 0