No. words: 1208; after pruning: 1182


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 9.9 (1,1:563)  534  0.00 0.18 0.18  BE403757Td06P088G01P095D121F1_012.ab1        1   561 (42)  C BE403757Td06P088G01P095D121R1_012.ab1   (41)   564     4 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  276 nodes

 140 str. conn. components

Path
    1  C BE403757Td06P088G01P095D121R1_012.ab1   605 
  111    BE403757Td06P088G01P095D121F1_012.ab1    69 
  135  C BE403757Td06P088G01P095D121R1_012.ab1   471 
  139    BE403757Td06P088G01P095D121F1_012.ab1    97 
  143  C BE403757Td06P088G01P095D121R1_012.ab1   463 
  151    BE403757Td06P088G01P095D121F1_012.ab1   109 
  159  C BE403757Td06P088G01P095D121R1_012.ab1   447 
  167    BE403757Td06P088G01P095D121F1_012.ab1   125 
  175  C BE403757Td06P088G01P095D121R1_012.ab1   431 
  187    BE403757Td06P088G01P095D121F1_012.ab1   145 
  263  C BE403757Td06P088G01P095D121R1_012.ab1   343 
  271    BE403757Td06P088G01P095D121F1_012.ab1   229 
  339  C BE403757Td06P088G01P095D121R1_012.ab1   267 
  351    BE403757Td06P088G01P095D121F1_012.ab1   309 
  355  C BE403757Td06P088G01P095D121R1_012.ab1   251 
  375    BE403757Td06P088G01P095D121F1_012.ab1   333 
  395  C BE403757Td06P088G01P095D121R1_012.ab1   211 
  419    BE403757Td06P088G01P095D121F1_012.ab1   377 
  443  C BE403757Td06P088G01P095D121R1_012.ab1   163 
  447    BE403757Td06P088G01P095D121F1_012.ab1   405 
  455  C BE403757Td06P088G01P095D121R1_012.ab1   151 
  463    BE403757Td06P088G01P095D121F1_012.ab1   421 
  495  C BE403757Td06P088G01P095D121R1_012.ab1   111 
  503    BE403757Td06P088G01P095D121F1_012.ab1   461 
  519  C BE403757Td06P088G01P095D121R1_012.ab1    87 
  523    BE403757Td06P088G01P095D121F1_012.ab1   481 
  527  C BE403757Td06P088G01P095D121R1_012.ab1    79 
  531    BE403757Td06P088G01P095D121F1_012.ab1   489 
  547  C BE403757Td06P088G01P095D121R1_012.ab1    59 
  555    BE403757Td06P088G01P095D121F1_012.ab1   513 
Contig length: old 644, new 645

Contig length: old 645, new 645
New start: 0