No. words: 1211; after pruning: 1185


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 8.9 (1,1:563)  539  0.00 0.18 0.00  BE403757Td10P088G01P095D121F1_008.ab1        1   561 (43)  C BE403757Td10P088G01P095D121R1_008.ab1   (42)   565     4 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  280 nodes

 142 str. conn. components

Path
    1  C BE403757Td10P088G01P095D121R1_008.ab1   607 
  388    BE403757Td10P088G01P095D121F1_008.ab1   345 
  548  C BE403757Td10P088G01P095D121R1_008.ab1    60 
  556    BE403757Td10P088G01P095D121F1_008.ab1   513 
Contig length: old 647, new 647

Contig length: old 647, new 647
New start: 0