No. words: 1148; after pruning: 1122


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.6 (1,1:605)  488  0.78 0.19 0.00  BE404374Sn24P146C02P129G071F1_058.ab1        1   516 (0)  C BE404374Sn24P146C02P129G071R1_058.ab1   (25)   607    91 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  248 nodes

 126 str. conn. components

Path
    1  C BE404374Sn24P146C02P129G071R1_058.ab1   632 
   49    BE404374Sn24P146C02P129G071F1_058.ab1    23 
   53  C BE404374Sn24P146C02P129G071R1_058.ab1   580 
   57    BE404374Sn24P146C02P129G071F1_058.ab1    31 
   97  C BE404374Sn24P146C02P129G071R1_058.ab1   536 
  101    BE404374Sn24P146C02P129G071F1_058.ab1    75 
  117  C BE404374Sn24P146C02P129G071R1_058.ab1   516 
  125    BE404374Sn24P146C02P129G071F1_058.ab1    99 
  149  C BE404374Sn24P146C02P129G071R1_058.ab1   484 
  157    BE404374Sn24P146C02P129G071F1_058.ab1   131 
  285  C BE404374Sn24P146C02P129G071R1_058.ab1   348 
  337    BE404374Sn24P146C02P129G071F1_058.ab1   311 
  349  C BE404374Sn24P146C02P129G071R1_058.ab1   284 
Contig length: old 632, new 632

Contig length: old 632, new 632
New start: 0