No. words: 1401; after pruning: 1375


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.4 (1,1:649)  637  0.00 0.00 0.00  BE404374Ta22P146B02P129G071F1_092.ab1        1   650 (46)  C BE404374Ta22P146B02P129G071R1_092.ab1   (55)   650     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  326 nodes

 165 str. conn. components

Path
    1  C BE404374Ta22P146B02P129G071R1_092.ab1   705 
   63    BE404374Ta22P146B02P129G071F1_092.ab1     8 
   67  C BE404374Ta22P146B02P129G071R1_092.ab1   639 
   71    BE404374Ta22P146B02P129G071F1_092.ab1    16 
  139  C BE404374Ta22P146B02P129G071R1_092.ab1   567 
  147    BE404374Ta22P146B02P129G071F1_092.ab1    92 
  179  C BE404374Ta22P146B02P129G071R1_092.ab1   527 
  259    BE404374Ta22P146B02P129G071F1_092.ab1   204 
  303  C BE404374Ta22P146B02P129G071R1_092.ab1   403 
  423    BE404374Ta22P146B02P129G071F1_092.ab1   368 
  435  C BE404374Ta22P146B02P129G071R1_092.ab1   271 
  459    BE404374Ta22P146B02P129G071F1_092.ab1   404 
  483  C BE404374Ta22P146B02P129G071R1_092.ab1   223 
  619    BE404374Ta22P146B02P129G071F1_092.ab1   564 
  627  C BE404374Ta22P146B02P129G071R1_092.ab1    79 
  647    BE404374Ta22P146B02P129G071F1_092.ab1   592 
  651  C BE404374Ta22P146B02P129G071R1_092.ab1    55 
  675    BE404374Ta22P146B02P129G071F1_092.ab1   620 
  683  C BE404374Ta22P146B02P129G071R1_092.ab1    23 
  687    BE404374Ta22P146B02P129G071F1_092.ab1   632 
  695  C BE404374Ta22P146B02P129G071R1_092.ab1    11 
  699    BE404374Ta22P146B02P129G071F1_092.ab1   644 
Contig length: old 751, new 751

Contig length: old 751, new 751
New start: 0