No. words: 1408; after pruning: 1368


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.3 (1,1:650)  618  0.92 0.00 0.15  BE404374Td01P146B02P129G071F1_079.ab1        1   651 (52)  C BE404374Td01P146B02P129G071R1_079.ab1   (55)   650     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  312 nodes

 158 str. conn. components

Path
    1  C BE404374Td01P146B02P129G071R1_079.ab1   705 
   96    BE404374Td01P146B02P129G071F1_079.ab1    41 
  100  C BE404374Td01P146B02P129G071R1_079.ab1   606 
  564    BE404374Td01P146B02P129G071F1_079.ab1   509 
  572  C BE404374Td01P146B02P129G071R1_079.ab1   134 
  604    BE404374Td01P146B02P129G071F1_079.ab1   549 
  628  C BE404374Td01P146B02P129G071R1_079.ab1    78 
  636    BE404374Td01P146B02P129G071F1_079.ab1   581 
  640  C BE404374Td01P146B02P129G071R1_079.ab1    66 
  644    BE404374Td01P146B02P129G071F1_079.ab1   589 
  652  C BE404374Td01P146B02P129G071R1_079.ab1    54 
  669    BE404374Td01P146B02P129G071F1_079.ab1   614 
Contig length: old 757, new 758

Contig length: old 758, new 758
New start: 0