No. words: 1226; after pruning: 1200


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 12.1 (1,1:598)  553  0.00 0.00 0.00  BE404374Td01P146C02P129G071F1_047.ab1        2   567 (0)  C BE404374Td01P146C02P129G071R1_047.ab1   (61)   598    33 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  284 nodes

 144 str. conn. components

Path
    1  C BE404374Td01P146C02P129G071R1_047.ab1   659 
   77    BE404374Td01P146C02P129G071F1_047.ab1    17 
   85  C BE404374Td01P146C02P129G071R1_047.ab1   575 
  101    BE404374Td01P146C02P129G071F1_047.ab1    41 
  133  C BE404374Td01P146C02P129G071R1_047.ab1   527 
  141    BE404374Td01P146C02P129G071F1_047.ab1    81 
  145  C BE404374Td01P146C02P129G071R1_047.ab1   515 
  149    BE404374Td01P146C02P129G071F1_047.ab1    89 
  169  C BE404374Td01P146C02P129G071R1_047.ab1   491 
  193    BE404374Td01P146C02P129G071F1_047.ab1   133 
  353  C BE404374Td01P146C02P129G071R1_047.ab1   307 
Contig length: old 659, new 659

Contig length: old 659, new 659
New start: 0