No. words: 728; after pruning: 702


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)   12    0.0 3.7 (1,1:319)  289  0.00 1.00 0.00  BE404580Ta11P026H02P016D071F1_044.ab1       15   315 (50)  C BE404580Ta11P026H02P016D071R1_044.ab1   (55)   308     5 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
12       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  140 nodes

 72 str. conn. components

Path
    1  C BE404580Ta11P026H02P016D071R1_044.ab1   363 
  122    BE404580Ta11P026H02P016D071F1_044.ab1    78 
  142  C BE404580Ta11P026H02P016D071R1_044.ab1   222 
  246    BE404580Ta11P026H02P016D071F1_044.ab1   202 
Contig length: old 408, new 409

Contig length: old 409, new 409
New start: 0