No. words: 1797; after pruning: 1771


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 18.8 (1,1:943)  828  0.12 0.00 0.00  BE405496Ld05P103H01P103H071F1_054.ab1       64   916 (0)  C BE405496Ld05P103H01P103H071R1_054.ab1   (0)   881    29 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  424 nodes

 214 str. conn. components

Path
    1    BE405496Ld05P103H01P103H071F1_054.ab1     1 
  511  C BE405496Ld05P103H01P103H071R1_054.ab1   434 
  619    BE405496Ld05P103H01P103H071F1_054.ab1   619 
  623  C BE405496Ld05P103H01P103H071R1_054.ab1   322 
  897    BE405496Ld05P103H01P103H071F1_054.ab1   897 
  905  C BE405496Ld05P103H01P103H071R1_054.ab1    40 
Contig length: old 944, new 944

Contig length: old 944, new 944
New start: 0