No. words: 1575; after pruning: 1549


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.6 (1,1:963)  599  0.00 0.00 0.00  BE405599Ld12P003A02P003A081F1_010.ab1      192   802 (0)  C BE405599Ld12P003A02P003A081R1_010.ab1   (0)   773   163 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  308 nodes

 156 str. conn. components

Path
    1    BE405599Ld12P003A02P003A081F1_010.ab1     1 
  403  C BE405599Ld12P003A02P003A081R1_010.ab1   562 
  407    BE405599Ld12P003A02P003A081F1_010.ab1   407 
  415  C BE405599Ld12P003A02P003A081R1_010.ab1   550 
  419    BE405599Ld12P003A02P003A081F1_010.ab1   419 
  495  C BE405599Ld12P003A02P003A081R1_010.ab1   470 
Contig length: old 964, new 964

Contig length: old 964, new 964
New start: 0