No. words: 1621; after pruning: 1582


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.7 (1,1:488)  477  0.00 0.00 0.20  BE406587As01P016B02B08F1_043.ab1        1   489 (52)  C BE406587As01P016B02B08R1_043.scf.scf   (52)   488     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    1    1
    2    1

Chimera merges: 


Contig 1:  244 nodes

 124 str. conn. components

Path
    1  C BE406587As01P016B02B08R1_043.scf.scf   540 
  504    BE406587As01P016B02B08F1_043.ab1   452 
  516  C BE406587As01P016B02B08R1_043.scf.scf    26 
  536    BE406587As01P016B02B08F1_043.ab1   484 
Contig length: old 592, new 593

Contig length: old 593, new 593
New start: 0