No. words: 1663; after pruning: 1637


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 17.1 (1,1:824)  767  0.00 0.00 0.12  BE423472Sn25P067D01P137G021F1_087.ab1       19   823 (33)  C BE423472Sn25P067D01P137G021R1_087.ab1   (0)   807     4 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  400 nodes

 202 str. conn. components

Path
    1    BE423472Sn25P067D01P137G021F1_087.ab1     1 
  210  C BE423472Sn25P067D01P137G021R1_087.ab1   616 
  214    BE423472Sn25P067D01P137G021F1_087.ab1   214 
  422  C BE423472Sn25P067D01P137G021R1_087.ab1   404 
  482    BE423472Sn25P067D01P137G021F1_087.ab1   482 
  486  C BE423472Sn25P067D01P137G021R1_087.ab1   340 
  566    BE423472Sn25P067D01P137G021F1_087.ab1   566 
  570  C BE423472Sn25P067D01P137G021R1_087.ab1   256 
  813    BE423472Sn25P067D01P137G021F1_087.ab1   814 
Contig length: old 856, new 855

Contig length: old 855, new 856
New start: 0 
I Change at: 810; seg lengths: entry 1, contig 0