No. words: 1704; after pruning: 1650


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 17.0 (1,1:814)  771  0.25 0.00 0.12  BE423472Td09P067D01P137G021F1_071.ab1        5   815 (35)  C BE423472Td09P067D01P137G021R1_071.ab1   (44)   810     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  400 nodes

 202 str. conn. components

Path
    1  C BE423472Td09P067D01P137G021R1_071.ab1   854 
   48    BE423472Td09P067D01P137G021F1_071.ab1     8 
  504  C BE423472Td09P067D01P137G021R1_071.ab1   351 
  837    BE423472Td09P067D01P137G021F1_071.ab1   797 
  841  C BE423472Td09P067D01P137G021R1_071.ab1    14 
  849    BE423472Td09P067D01P137G021F1_071.ab1   810 
Contig length: old 889, new 889

Contig length: old 889, new 889
New start: 0