No. words: 1032; after pruning: 1006


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 5.2 (1,1:378)  361  0.53 0.26 0.00  BE424246Ld07P129C02P129C081F1_013.ab1        1   379 (124)  C BE424246Ld07P129C02P129C081R1_013.ab1   (149)   380     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  176 nodes

 90 str. conn. components

Path
    1  C BE424246Ld07P129C02P129C081R1_013.ab1   529 
  251    BE424246Ld07P129C02P129C081F1_013.ab1   101 
  255  C BE424246Ld07P129C02P129C081R1_013.ab1   275 
  307    BE424246Ld07P129C02P129C081F1_013.ab1   157 
  311  C BE424246Ld07P129C02P129C081R1_013.ab1   219 
  355    BE424246Ld07P129C02P129C081F1_013.ab1   205 
  359  C BE424246Ld07P129C02P129C081R1_013.ab1   171 
  363    BE424246Ld07P129C02P129C081F1_013.ab1   213 
  367  C BE424246Ld07P129C02P129C081R1_013.ab1   163 
  395    BE424246Ld07P129C02P129C081F1_013.ab1   245 
  403  C BE424246Ld07P129C02P129C081R1_013.ab1   127 
  411    BE424246Ld07P129C02P129C081F1_013.ab1   261 
  419  C BE424246Ld07P129C02P129C081R1_013.ab1   111 
  423    BE424246Ld07P129C02P129C081F1_013.ab1   273 
  427  C BE424246Ld07P129C02P129C081R1_013.ab1   103 
  435    BE424246Ld07P129C02P129C081F1_013.ab1   285 
  443  C BE424246Ld07P129C02P129C081R1_013.ab1    87 
  463    BE424246Ld07P129C02P129C081F1_013.ab1   313 
  490  C BE424246Ld07P129C02P129C081R1_013.ab1    40 
  494    BE424246Ld07P129C02P129C081F1_013.ab1   344 
Contig length: old 653, new 653

Contig length: old 653, new 653
New start: 0