No. words: 1016; after pruning: 990


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 2.5 (1,1:899)  116  0.00 0.00 0.00  BE425919Ld02P067H01P067H071F1_028.ab1      407   522 (0)  C BE425919Ld02P067H01P067H071R1_028.ab1   (0)   494   379 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  60 nodes

 32 str. conn. components

Path
    1    BE425919Ld02P067H01P067H071F1_028.ab1     1 
  454  C BE425919Ld02P067H01P067H071R1_028.ab1   447 
  458    BE425919Ld02P067H01P067H071F1_028.ab1   458 
  474  C BE425919Ld02P067H01P067H071R1_028.ab1   427 
  486    BE425919Ld02P067H01P067H071F1_028.ab1   486 
  490  C BE425919Ld02P067H01P067H071R1_028.ab1   411 
  506    BE425919Ld02P067H01P067H071F1_028.ab1   506 
  510  C BE425919Ld02P067H01P067H071R1_028.ab1   391 
Contig length: old 900, new 900

Contig length: old 900, new 900
New start: 0