No. words: 1049; after pruning: 1023


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.7 (1,1:544)  479  0.41 0.00 0.00  BE426222Ld03P067A02P067A081F1_047.ab1        1   492 (0)  C BE426222Ld03P067A02P067A081R1_047.ab1   (12)   545    54 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  244 nodes

 124 str. conn. components

Path
    1  C BE426222Ld03P067A02P067A081R1_047.ab1   557 
   16    BE426222Ld03P067A02P067A081F1_047.ab1     4 
  164  C BE426222Ld03P067A02P067A081R1_047.ab1   394 
  180    BE426222Ld03P067A02P067A081F1_047.ab1   168 
  192  C BE426222Ld03P067A02P067A081R1_047.ab1   366 
  200    BE426222Ld03P067A02P067A081F1_047.ab1   188 
  212  C BE426222Ld03P067A02P067A081R1_047.ab1   346 
  220    BE426222Ld03P067A02P067A081F1_047.ab1   208 
  308  C BE426222Ld03P067A02P067A081R1_047.ab1   250 
Contig length: old 557, new 557

Contig length: old 557, new 557
New start: 0