No. words: 1552; after pruning: 1526


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.4 (1,1:1172)  367  0.00 0.00 0.00  BE426393Ld03P016D02P016D081F1_035.ab1      388   766 (0)  C BE426393Ld03P016D02P016D081R1_035.ab1   (0)   786   408 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  192 nodes

 98 str. conn. components

Path
    1    BE426393Ld03P016D02P016D081F1_035.ab1     1 
  579  C BE426393Ld03P016D02P016D081R1_035.ab1   595 
  591    BE426393Ld03P016D02P016D081F1_035.ab1   591 
  595  C BE426393Ld03P016D02P016D081R1_035.ab1   579 
  603    BE426393Ld03P016D02P016D081F1_035.ab1   603 
  611  C BE426393Ld03P016D02P016D081R1_035.ab1   563 
Contig length: old 1173, new 1173

Contig length: old 1173, new 1173
New start: 0