No. words: 1189; after pruning: 1163


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.5 (1,1:522)  508  0.19 0.00 0.00  BE426418Td02P146A04P129E081R1_016.ab1        1   523 (77)  C BE426418Td02P146A04P129E081F1_016.ab1   (66)   523     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  260 nodes

 132 str. conn. components

Path
    1  C BE426418Td02P146A04P129E081F1_016.ab1   589 
  198    BE426418Td02P146A04P129E081R1_016.ab1   132 
  206  C BE426418Td02P146A04P129E081F1_016.ab1   384 
  262    BE426418Td02P146A04P129E081R1_016.ab1   196 
  282  C BE426418Td02P146A04P129E081F1_016.ab1   308 
  310    BE426418Td02P146A04P129E081R1_016.ab1   244 
  350  C BE426418Td02P146A04P129E081F1_016.ab1   240 
  354    BE426418Td02P146A04P129E081R1_016.ab1   288 
  504  C BE426418Td02P146A04P129E081F1_016.ab1    86 
  512    BE426418Td02P146A04P129E081R1_016.ab1   446 
Contig length: old 666, new 666

Contig length: old 666, new 666
New start: 0