No. words: 1247; after pruning: 1207


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.6 (1,1:480)  446  1.04 0.21 0.00  BE442617Ld10P067H06P067H121F1_084.ab1        1   481 (149)  C BE442617Ld10P067H06P067H121R1_084.ab1   (135)   482     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  228 nodes

 116 str. conn. components

Path
    1  C BE442617Ld10P067H06P067H121R1_084.ab1   617 
  156    BE442617Ld10P067H06P067H121F1_084.ab1    20 
  160  C BE442617Ld10P067H06P067H121R1_084.ab1   458 
  238    BE442617Ld10P067H06P067H121F1_084.ab1   102 
  282  C BE442617Ld10P067H06P067H121R1_084.ab1   336 
  310    BE442617Ld10P067H06P067H121F1_084.ab1   174 
Contig length: old 766, new 766

Contig length: old 766, new 766
New start: 0 
S Change at: 680; seg lengths: entry 1, contig 1