No. words: 1252; after pruning: 1226


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.5 (1,1:491)  469  0.00 0.00 0.61  BE442818Ld04P129A03P129A091F1_002.ab1        1   494 (137)  C BE442818Ld04P129A03P129A091R1_002.ab1   (130)   491     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  238 nodes

 121 str. conn. components

Path
    1  C BE442818Ld04P129A03P129A091R1_002.ab1   621 
  278    BE442818Ld04P129A03P129A091F1_002.ab1   148 
  282  C BE442818Ld04P129A03P129A091R1_002.ab1   340 
  298    BE442818Ld04P129A03P129A091F1_002.ab1   168 
  318  C BE442818Ld04P129A03P129A091R1_002.ab1   304 
  330    BE442818Ld04P129A03P129A091F1_002.ab1   200 
  350  C BE442818Ld04P129A03P129A091R1_002.ab1   272 
  354    BE442818Ld04P129A03P129A091F1_002.ab1   224 
  358  C BE442818Ld04P129A03P129A091R1_002.ab1   264 
  370    BE442818Ld04P129A03P129A091F1_002.ab1   240 
  378  C BE442818Ld04P129A03P129A091R1_002.ab1   244 
  382    BE442818Ld04P129A03P129A091F1_002.ab1   252 
  398  C BE442818Ld04P129A03P129A091R1_002.ab1   224 
  418    BE442818Ld04P129A03P129A091F1_002.ab1   288 
  442  C BE442818Ld04P129A03P129A091R1_002.ab1   180 
  482    BE442818Ld04P129A03P129A091F1_002.ab1   352 
  494  C BE442818Ld04P129A03P129A091R1_002.ab1   128 
  502    BE442818Ld04P129A03P129A091F1_002.ab1   372 
  510  C BE442818Ld04P129A03P129A091R1_002.ab1   112 
  518    BE442818Ld04P129A03P129A091F1_002.ab1   388 
Contig length: old 760, new 761

Contig length: old 761, new 761
New start: 0